PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI02G29040.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family Dof
Protein Properties Length: 386aa    MW: 38990.4 Da    PI: 9.4414
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI02G29040.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1252.4e-3981142263
           zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                      kekal+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss
  ORUFI02G29040.1  81 KEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSS 142
                      7899******************************************************9875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074783.0E-3177139IPR003851Zinc finger, Dof-type
PfamPF027012.6E-3383139IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.05985139IPR003851Zinc finger, Dof-type
PROSITE patternPS01361087123IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MSTIKISHRG PGRGLGLVKP MEEMLMGANP NPNGSSNQPP PPPSSAASAQ RPIAPPAAGA  60
AAGAGAAGAG AGTERRARPQ KEKALNCPRC NSTNTKFCYY NNYSLQQPRY FCKTCRRYWT  120
EGGSLRNVPV GGGSRKNKRS SSSVVPSAAA SASTSAAVSG SVPVGLAAKN PKLMHEGAQD  180
LNLAFPHHHG RALQPPEFTA FPSLESSSVC NPGGNLAAAN GAGGRGSVGA FSAMELLRST  240
GCYVPLPQMA PLGMPAEYAA AGFHLGEFRM PPPPQQQQQQ QAQTVLGFSL DTHGAGAGGG  300
SGVFGACSAG LQESAAGRLL FPFEDLKPVV SAAAGDANSG GDHQYDHGKN QGGGGGVIGG  360
HEAPGFWNSS MIGNGSSNGG GGGGSW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0281300.0AB028130.1 Oryza sativa Japonica Group mRNA for Dof zinc finger protein, complete cds, clone: OsDof-9.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015627550.10.0PREDICTED: dof zinc finger protein DOF4.6 isoform X1
TrEMBLA0A0D9YWB90.0A0A0D9YWB9_9ORYZ; Uncharacterized protein
TrEMBLA0A0E0NJ430.0A0A0E0NJ43_ORYRU; Uncharacterized protein
STRINGLOC_Os02g45200.10.0(Oryza sativa Japonica Group)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.11e-42Dof family protein